76 posts tagged with "seqera cloud"

Feature updates and improvements​

Studios​

• Added NVIDIA environment variables for GPU Studios.

Compute environments​

• Added bring-your-own networking support for Azure Cloud compute environments.

Pipelines​

• Added pipeline secrets support for scheduler-backed Cloud compute environments, covering both storage and the launch form.
• Disabled Nextflow version selection when a custom launcher container is pinned.
• Updated Nextflow launcher to v26.04.6.

Security​

• Redacted full user email addresses from logs.

Bug fixes​

Compute environments​

• Added retries for AWS Forge calls under IAM throttling.
• Fixed xpack-google secret resolution by setting GOOGLE_CLOUD_PROJECT on the GCP Batch head job.
• Fixed work directory validation for legacy Seqera Compute configurations.
• Surfaced actionable GCP Batch API errors instead of the misleading Workload Identity Federation hint.

Feature updates and improvements​

Compute environments​

• Added the compute environment ID to the compute environment row card.
• Added the c9gd instance family to the NVMe instance list.
• Updated the list of available Azure regions.

Bug fixes​

Compute environments​

• Added a clear error message when Azure Batch pool deletion fails.
• Disabled compute environment form submission while the form is invalid.

Data explorer​

• Signed GCS genomic file URLs with V4 for IGV preview.

Feature updates and improvements​

Compute environments​

• Added VPC and multiple subnet selection to AWS Cloud compute environments.
• Added the number of instances provisioned per run to the run page, sourced from the Scheduler run summary.
• Added the g7 instance family to the NVMe list.
• Required Spot provisioning for Fusion snapshots and aligned the GCP provisioning interface.
• Refined the compute environment list with a type label, Cloud feature hiding, and an Invalid status.

Pipelines​

• Updated Nextflow to v26.04.4.

Access control​

• Split the data_link and data_link_object permissions into separate scopes. Workspace members with View, Connect, or Launch roles can now download files and generate download URLs from data-links. Upload and delete file operations remain restricted to Maintain and above.
• Added pre-filling of first and last name from GitHub signup.
• Added a groups scope to SSO connections.
• Added handling for malformed groups claims.
• Rejected group creation with commas when Auth0 is enabled.

Monitoring and observability​

• Added audit entries for pre-flight cron status transitions.

General​

• Added a default workspace preference to the user profile.
• Listed avatar and username rows in the avatar-group popover.

Bug fixes​

Pipelines​

• Fixed lineage incorrectly showing as not enabled for submitted runs when it was enabled.

Access control​

• Fixed detection of a personal access token as a duplicate when creating a GitHub App with the same credentials.

General​

• Fixed uploaded avatars not persisting when an admin creates a user.
• Fixed unknown workspace sub-routes to redirect to the workspace root.
• Fixed the favicon to follow the OS light and dark color scheme.
• Fixed several UI issues across the run page, Data Explorer, and search.

Feature updates and improvements​

Compute environments​

• Redesigned the compute environment list as a row-card table.
• Added attribute chips to the compute environment list.
• Added an on-demand credentials validation button.

Feature updates and improvements​

Compute environments​

• Added AWS Cloud compute environment EBS volume encryption with an optional KMS key.
• Added the m9gd instance family to the NVMe list.

Pipelines​

• Added a launch output directory option to the launch form.
• Added a shareable deep link to the task details view.
• Showed the metrics tab for canceled workflow runs.

Bug fixes​

Monitoring​

• Included gpuMetrics in task JSON serialization so GPU usage is now visible in the task payload.

Pipelines​

• Fixed an unexpected error when the workflow limiter canceled a newly launched workflow.
• Preserved a custom schema when added for the first time in pipeline edit mode.

Feature updates and improvements​

Access control​

• Enabled GitHub App credentials for all workspaces.

Compute environments​

• Added security group name search to AWS drop-downs.

Pipelines​

• Surfaced launch-time settings, including profiles and syntax parser, in the run config tab.

Bug fixes​

Data explorer​

• Fixed IGV index file handling by presigning indexURLs independently.

Pipelines​

• Fixed the Nextflow syntax parser v2 toggle to seed from the saved launch config.
• Included syntaxParser in the workflow launch API response.
• Cleared stale main script launch errors.
• Fixed the launch form to skip the lineage request in user space.

Feature updates and improvements​

Pipelines​

• Exposed tower.launch.config.maxSize to frontend validators so launch configuration size limits stay aligned with the backend.

Bug fixes​

Pipelines​

• Added frontend validation of paramsText against its JSON-serialized size to align launch parameter limits with backend submission constraints.
• Added missing metadata, pipeline versioning, and data lineage fields to the workflow launch form summary.
• Fixed the workflow launch payload to always send lineage.enabled so the data lineage toggle setting persists correctly.

General​

• Fixed the workspace switcher to keep the search input focused during arrow-key navigation.
• Fixed background worker shutdown by draining workers before JedisPool shutdown to prevent dropped jobs.
• Fixed navigation switcher responsiveness.

Feature updates and improvements​

Compute environments​

• Added a configurable boot disk size for Azure Batch pools.
• Added r8idn, r8idb, m8idn, and m8idb instance families to the NVMe list.

Pipelines​

• Added the Lineage ID to the Run Info page.

General​

• Introduced a panel search input and integrated it into the navigation switcher component.
• Improved workspace switch redirects to preserve the active sidebar section.

Bug fixes​

Compute environments​

• Deduplicated the compute environment entry in the launch drop-down.

Data Explorer​

• Made credentials a required field in the Add data repository form.

Pipelines​

• Refined workflow_updated events that contain no diff.
• Prevented duplicate GitHub credentials across PAT and GitHub App types.
• Resolved file paths to the most recent lineage record.

Feature updates and improvements​

Compute environments​

• Added a CloudInfo cloud instance type catalog and chip-selector filters specification.
• Added a description field to the Compute Environment V2 form.

Datasets​

• Exposed dataset file size in version API responses.

Pipelines​

• Added a Nextflow syntax parser v2 toggle.
• Added launch-time settings to the workflow configuration tab.

Studios​

• Added the compute environment name to the Studios row card.
• Added new API endpoints to fetch compatible compute environments for a Studio and update the compute environment on a Studio.
• Enabled updating the compute environment on a Studio.
• Resolved the user on SSH Studio connection attempts.

Bug fixes​

Data Explorer​

• Supported GCS pre-signed URLs with WIF credentials in Data Explorer.

Pipelines​

• Disabled the lineage launch toggle when lineage settings are not configured or when the compute environment does not support lineage.

Studios​

• Recovered legacy Studio event names in the usage query.
• Fell back to baseline Studio capabilities when the manifest is missing or the Studio version is not found in the manifest.

Feature updates and improvements​

Access control​

• Automatically disabled SSO on organization deletion.
• Enabled SSO domain verification.
• Skipped showcase workspace enrollment for free-tier users.

Compute environments​

• Added an export configuration option to the compute environment menu.

General​

• Added inactive scope styles and a settings breadcrumb trail.
• Aligned workspace settings routes and page titles.
• Updated workspace settings hub copy and added E2E selectors.
• Updated the labels page and modal type copy.

Bug fixes​

Compute environments​

• Fixed the compute environment edit form to skip name copy-rename when opened.

Data Explorer​

• Prevented bucket actions from becoming stuck in the CREATING state.

Studios​

• Fixed the redirection route for the Save as new Studio action.